Hannah-Marie Martiny

Employment

• Technical University of Denmark

Education

• Technical University of Denmark MSc. Bioinformatics and Systems Biology
  2017 - 2019
• Technical University of Denmark PhD

Projects & Funding

Projects & funding information is unavailable.

Publications (16)

• PanRes: a database of latent and acquired antimicrobial resistance allowing 3D-based protein homology search
  Bioinformatics 2026 DOI: 10.1093/bioinformatics/btag776
  +Save
• Author Correction: Geographics and bacterial networks differently shape the acquired and latent global sewage resistomes
  Nature Communications 2026 DOI: 10.1038/s41467-026-74855-7
  +Save
• PanRes: A database of latent and acquired antimicrobial resistance allowing 3D-based protein homology search
  2026 DOI: 10.64898/2026.06.22.733705
  +Save
• Geographics and bacterial networks differently shape the acquired and latent global sewage resistomes
  Hannah-Marie Martiny, Patrick Munk, Alessandro Fuschi +97 more
  Nature Communications 2025 DOI: 10.1038/s41467-025-66070-7
  +Save
• Antibiotic resistance selection and deselection in municipal wastewater from 47 countries
  Nature Communications 2025 DOI: 10.1038/s41467-025-65670-7
  +Save
• ARGprofiler—a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets
  Bioinformatics 2024 DOI: 10.1093/bioinformatics/btae086
  +Save
• Utilizing co-abundances of antimicrobial resistance genes to identify potential co-selection in the resistome
  Microbiology Spectrum 2024 DOI: 10.1128/spectrum.04108-23
  +Save
• De-novo assemblies of mcr sequencing datasets
  2023
  +Save
• Utilizing co-abundances of antimicrobial resistance genes to identify potential co-selection in the resistome
  2022 DOI: 10.1101/2022.12.19.519133
  +Save
• A curated data resource of 214K metagenomes for characterization of the global antimicrobial resistome
  PLOS Biology 2022 DOI: 10.1371/journal.pbio.3001792
  +Save
• A curated data resource of 214K metagenomes for characterization of the global resistome
  2022 DOI: 10.1101/2022.05.06.490940
  +Save
• Global Distribution of mcr Gene Variants in 214K Metagenomic Samples
  mSystems 2022 DOI: 10.1128/msystems.00105-22
  +Save
• Analysis of global emergence and spread of antimicrobial resistance in 214k host and environmental samples
  2022
  +Save
• NetSolP: predicting protein solubility in E. coli using language models
  Vineet Thumuluri, Hannah-Marie Martiny, José Juan Almagro Armenteros +3 more
  Bioinformatics 2022 DOI: 10.1093/bioinformatics/btab801
  +Save
• Global distribution of mcr gene variants in 214,095 metagenomic samples
  2021 DOI: 10.21203/rs.3.rs-640935/v1
  +Save
• Deep protein representations enable recombinant protein expression prediction
  2021 DOI: 10.1101/2021.05.13.443426
  +Save