John Sekar

Employment

• Icahn School of Medicine at Mount Sinai Senior Scientist
  2022 - Present
• Icahn School of Medicine at Mount Sinai Postdoctoral Fellow
  2016 - 2022

Education

• University of Pittsburgh Ph.D. Computational Biology
  2007 - 2015
• Anna University B.Tech. Industrial Biotechnology
  2003 - 2007

Projects & Funding

Projects & funding information is unavailable.

Publications (10)

• KinAce: a web portal for exploring kinase-substrate interactions
  2023 DOI: 10.1101/2023.12.08.570875
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• BpForms and BcForms: a toolkit for concretely describing non-canonical polymers and complexes to facilitate global biochemical networks
  Genome Biology 2020 DOI: 10.1186/s13059-020-02025-z
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• An introduction to rule-based modeling of immune receptor signaling
  Systems Immunology 2018 DOI: 10.1201/9781315119847-5
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• A blueprint for human whole-cell modeling
  Current Opinion in Systems Biology 2018 DOI: 10.1016/j.coisb.2017.10.005
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• Emerging whole-cell modeling principles and methods
  Current Opinion in Biotechnology 2018 DOI: 10.1016/j.copbio.2017.12.013
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• Automated visualization of rule-based models
  PLOS Computational Biology 2017 DOI: 10.1371/journal.pcbi.1005857
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• Energy-based modeling in BioNetGen
  Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016 2017 DOI: 10.1109/BIBM.2016.7822739
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• BioNetGen 2.2: advances in rule-based modeling
  Bioinformatics 2016 DOI: 10.1093/bioinformatics/btw469
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• Rule-based Modeling of Cell Signaling: Advances in Model Construction, Visualization and Simulation
  2015
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• Rule-Based Modeling of Signal Transduction: A Primer
  Computational Modeling of Signaling Networks 2012 DOI: 10.1007/978-1-61779-833-7_9
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