Milad Rafiee Vahid

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Publications (9)

• AttOmics: attention-based architecture for diagnosis and prognosis from omics data
  Bioinformatics 2023 DOI: 10.1093/bioinformatics/btad232
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• High-resolution alignment of single-cell and spatial transcriptomes with CytoSPACE
  Milad Rafiee Vahid, Erin L. Brown, Chloé Beate Steen +5 more
  Nature Biotechnology 2023 DOI: 10.1038/s41587-023-01697-9
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• DiSiR: fast and robust method to identify ligand–receptor interactions at subunit level from single-cell RNA-sequencing data
  NAR Genomics and Bioinformatics 2023 DOI: 10.1093/nargab/lqad030
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• Robust alignment of single-cell and spatial transcriptomes with CytoSPACE
  2022 DOI: 10.1101/2022.05.20.488356
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• T cell characteristics associated with toxicity to immune checkpoint blockade in patients with melanoma
  Alexander X. Lozano, Aadel A. Chaudhuri, Aishwarya Nene +17 more
  Nature Medicine 2022 DOI: 10.1038/s41591-021-01623-z
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• Effect of Pixelation on the Parameter Estimation of Single Molecule Trajectories
  IEEE Transactions on Computational Imaging 2021 DOI: 10.1109/TCI.2020.3039951
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• Fisher Information Matrix for Single Molecules with Stochastic Trajectories
  SIAM Journal on Imaging Sciences 2020 DOI: 10.1137/19M1242562
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• State space approach to single molecule localization in fluorescence microscopy
  Biomedical Optics Express 2017 DOI: 10.1364/boe.8.001332
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• A state space based approach to localizing single molecules from multi-emitter images
  Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXIV 2017 DOI: 10.1117/12.2253175
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