AM

Amit K. Mandal

Also known as: Amit Mandal

University of Oxford Nuffield Department of Surgical Sciences, University of Oxford, Institute of Genomics and Integrative Biology CSIR, Imperial College London National Heart and Lung Institute

ORCID iD 0000-0002-2530-8103
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About

I am a bioinformatician experienced in inferring genome architecture and function using high-throughput DNA and RNA datasets.
My PhD was on transposable elements (‘selfish genes’) embedded in the human transcriptome, and the plasticity created due to that.
From there I have moved to studying ‘selfish cells’ (tumours) during post-doctoral research.
Presently, am with the Buczacki lab at the Old Road campus in Oxford, who use organoid models of colorectal cancers. My work here involves deciphering tumour evolution in the context of cell differentiation routes, as inferred from bulk or single-cell sequencing approaches.

Employment

  • University of Oxford Nuffield Department of Surgical Sciences The Lee Placito fellowship in Bioinformatics
    2022 - Present
  • Imperial College London National Heart and Lung Institute Research Associate (Bioinformatician)
    2017 - 2022
  • Cancer Research UK Manchester Institute Postdoc
    2014 - 2017
  • University of Oxford

Education

  • Institute of Genomics and Integrative Biology CSIR Ph.D.
    2006 - 2012

Projects & Funding

Projects & funding information is unavailable.

Publications (14)