CJ
Chirag Jain
Indian Institute of Science, National Institutes of Health, Georgia Institute of Technology, Indian Institute of Technology Delhi
0000-0002-4300-0794
About
Dr. Chirag Jain is an Assistant Professor in the Department of Computational and Data Sciences at the Indian Institute of Science, Bangalore. He directs ATCG (Algorithmic Techniques for Computational Genomics) lab, which develops mathematical and computational techniques for data-intensive problems in molecular biology. These techniques are applicable to biomedical domains including human genetics, infectious diseases and cancer research.
Employment
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National Institutes of Health Postdoctoral Fellow2019 - 2020
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Indian Institute of Science Assistant Professor
Education
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Georgia Institute of Technology Ph.D.2014 - 2019
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Indian Institute of Technology Delhi B.Tech.2010 - 2014
Projects & Funding
Projects & funding information is unavailable.
Publications (37)
- Mapping genetic diversity with the GenomeIndia project. Save
- FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins Save
- Telomere-to-telomere assembly by preserving contained reads. Save
- Haplotype-aware sequence alignment to pangenome graphs. Save
- Co-linear Chaining on Pangenome Graphs Save
- On the Coverage Required for Diploid Genome Assembly Save
- Gap-Sensitive Colinear Chaining Algorithms for Acyclic Pangenome Graphs Save
- Coverage-preserving sparsification of overlap graphs for long-read assembly Save
- A Lossless Compression Pipeline for Petabyte-Scale Whole Genome Sequencing Data Save
- Accelerating minimap2 for long-read sequencing applications on modern CPUs Save