akanksha srivastava

Employment

• Australian National University RESEARCH OFFICER
  2019 - Present

Education

Education history is unavailable.

Projects & Funding

Projects & funding information is unavailable.

Publications (10)

• RATTLE: reference-free reconstruction and quantification of transcriptomes from Nanopore sequencing
  Genome Biology 2022 DOI: 10.1186/s13059-022-02715-w
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• Intestinal stem cell aging signature reveals a reprogramming strategy to enhance regenerative potential
  npj Regenerative Medicine 2022 DOI: 10.1038/s41536-022-00226-7
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• Simultaneous identification of m6A and m5C reveals coordinated RNA modification at single-molecule resolution
  2022 DOI: 10.1101/2022.03.14.484124
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• Systematic benchmarking of tools for CpG methylation detection from nanopore sequencing
  Nature Communications 2021 DOI: 10.1038/s41467-021-23778-6
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• Extending the Genotype inBrachypodiumby Including DNA Methylation Reveals a Joint Contribution with Genetics on Adaptive Traits
  G3 Genes|Genomes|Genetics 2020 DOI: 10.1534/g3.120.401189
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• HOME: A histogram based machine learning approach for effective identification of differentially methylated regions
  BMC bioinformatics 2019
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• ReorientExpress: reference-free orientation of nanopore cDNA reads with deep learning
  Genome Biology 2019
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• Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination
  Genome biology 2017
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• DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity
  Genome research 2016
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• Biodegradation of carbazole and dibenzothiophene by bacteria isolated from petroleum-contaminated sites
  Bioremediation journal 2011
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