Sanjay Kumar

About

I have completed my PhD in Biological Sciences and possess extensive experience in bioinformatics and structural biology. My expertise includes molecular modeling, molecular dynamics simulations, free energy analysis, CryoEM single-particle analysis (SPA), and tomography data processing and analysis

Employment

• The City College of New York Division of Science PostDoc Fellow
  2022 - 2025
• CSIR-Central Drug Research Institute ICMR-SRF
  2018 - 2021
• CSIR-Central Drug Research Institute Project Assistant
  2015 - 2017
• Biotech Park Bioinformati Programmer
  2013 - 2015

Education

Education history is unavailable.

Projects & Funding

Projects & funding information is unavailable.

Publications (25)

• Understanding the infection mechanism of Φ8 using infection method in Pseudomonas syringae pv. Phaseolicola strain: In-situ CryoET analysis
  2025 DOI: 10.1101/2025.09.29.678632
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• Using In Silico Methods to Identify Protein Tyrosine Kinase A (PtkA) Homolog in Non-Tuberculous Mycobacteria (NTM)
  Kinases and Phosphatases 2024 DOI: 10.3390/kinasesphosphatases2040022
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• Regulation of futile ligation during early steps of BER in M. tuberculosis is carried out by a β-clamp-XthA-LigA tri-component complex
  International Journal of Biological Macromolecules 2023 DOI: 10.1016/j.ijbiomac.2022.11.094
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• Mycobacterium tuberculosis Endonuclease VIII 2 (Nei2) forms a prereplicative BER complex with DnaN: Identification, characterization, and disruption of complex formation
  Molecular Microbiology 2022 DOI: 10.1111/mmi.14848
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• Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD+-dependent DNA ligase A.
  Journal of structural biology 2020 DOI: 10.1016/j.jsb.2020.107655
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• Identification of active molecules against Mycobacterial Shikimate Kinase from Chemical library and their affinity with different domains
  [] 2020 DOI: 10.22541/au.160491622.24853329/v1
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• M. tuberculosis class II apurinic/ apyrimidinic-endonuclease/3'-5' exonuclease (XthA) engages with NAD+-dependent DNA ligase A (LigA) to counter futile cleavage and ligation cycles in base excision repair.
  Nucleic acids research 2020 DOI: 10.1093/nar/gkaa188
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• A study of CCD8 genes/proteins in seven monocots and eight dicots.
  PloS one 2019 DOI: 10.1371/journal.pone.0213531
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• Molecular docking, dynamics, and pharmacology studies on bexarotene as an agonist of ligand-activated transcription factors, retinoid X receptors.
  Journal of cellular biochemistry 2019 DOI: 10.1002/jcb.28455
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• Functional and structural insights into candidate genes associated with nitrogen and phosphorus nutrition in wheat (Triticum aestivum L.).
  International journal of biological macromolecules 2018 DOI: 10.1016/j.ijbiomac.2018.06.009
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