UP

Upamanyu Pal

University of Calcutta

ORCID iD 0000-0002-6398-0339

About

With a Ph.D. awarded in February 2023 from the Department of Zoology, University of Calcutta, focusing on the etiology of Down syndrome by studying the maternal genetic risk factors for nondisjunction of chromosome 21, I bring over 6 years of dedicated research experience in genetic risk factor analysis from clinical samples. My academic background includes an M.Sc. in Zoology with specialization in Genetics and Immunology, as well as a B.Sc. Hons in Zoology, both obtained from the University of Calcutta. My doctoral work was focused on understanding the association of genetic risk factors that influenced errors during homologous recombination, which results in chromosome 21 non-disjunction either during meiosis I or meiosis II among women with Down syndrome child. My study exhibited that the prevalence of allelic variants of the genes- MCM9, RNF212, and PRDM9 were contributing risk factors for the non-disjunction in our Indian Bengali speaking population. Furthermore, these genes have some novel variants that I discovered and submitted to NCBI GenBank and was given an accession number for each. I have shown that the risk variants of these genes significantly increased the frequency of non-exchange cross-over events during meiosis I across all age groups (i.e., young, middle, and old age groups), which is a well-established molecular correlate for non-disjunction. In addition, the location of the chiasma during a single recombination event across the Hsa21q arm was shown to be impacted by the risk variants of RNF212 and PRDM9. While PRDM9 risk variants show both telomeric and centromeric chiasma formation, risk variants of RNF212 contribute to the formation of telomeric chiasma. Therefore, it is possible to speculate that while PRDM9 risk variants show an age-dependent pattern of aberrant recombination leading to NDJ, RNF212 risk variants support an age-independent pattern of aberrant recombination. The MCM9 variants have no effect on the chiasma location. I have also determined that these variants have probable damaging effects at the mRNA and protein level via in silico approach.

Employment

  • University of Calcutta Senior Research Fellow
    2019 - 2023
  • University of Calcutta Junior Research Fellow
    2016 - 2018

Education

  • University of Calcutta Ph.D.
    2016 - 2023
  • University of Calcutta B.Sc. Hons
    2009 - 2012

Projects & Funding

Projects & funding information is unavailable.

Publications (8)