Zachary A Martinez

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Publications (8)

• Pretrained protein language models choose between sequence novelty and structural completeness
  2025 DOI: 10.1101/2025.10.01.679905
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• Optimizing Protein Production in the One-Pot PURE System: Insights into Reaction Composition and Expression Efficiency
  ACS Synthetic Biology 2025 DOI: 10.1021/acssynbio.4c00779
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• Benchmarking Protein Language Models for Protein Crystallization
  2024 DOI: 10.1101/2024.09.02.610758
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• Optimizing protein production in the One-Pot Pure system: insights into reaction composition and expression efficiency
  2024 DOI: 10.1101/2024.06.19.599772
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• Unexplored regions of the protein sequence-structure map revealed at scale by a library of foldtuned language models
  2023 DOI: 10.1101/2023.12.22.573145
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• TRILL: Orchestrating Modular Deep-Learning Workflows for Democratized, Scalable Protein Analysis and Engineering
  2023 DOI: 10.1101/2023.10.24.563881
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• Organizing the Global Diversity of Microviruses
  mBio 2022 DOI: 10.1128/mbio.00588-22
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• Defensive hypervariable regions confer superinfection exclusion in microviruses
  Proceedings of the National Academy of Sciences 2021 DOI: 10.1073/pnas.2102786118
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