Xiaole Yin

Employment

• Nanyang Technological University Assistant Professor
  2025 - Present

Education

Education history is unavailable.

Projects & Funding

Projects & funding information is unavailable.

Publications (54)

• Microenvironment-driven interactions between mobile genetic elements and defense systems modulate the plastisphere resistome
  Water Research 2026 DOI: 10.1016/j.watres.2026.125750
  +Save
• Identification of antimicrobial peptides from ancient gut microbiomes
  Nature Communications 2026 DOI: 10.1038/s41467-026-68495-0
  +Save
• From short-lived to persistent: the significance of extracellular RNA in disinfected drinking water microbiomes
  Npj Clean Water 2026 DOI: 10.1038/S41545-026-00572-9
  +Save
• Assessing antimicrobial resistance connectivity across One Health sectors
  Liguan Li, Bing Jhang Li, Xiaole Yin +52 more
  Nature Water 2025 DOI: 10.1038/s44221-025-00514-8
  +Save
• Longitudinal metagenomic analysis on antibiotic resistome, mobilome, and microbiome of river ecosystems in a sub-tropical metropolitan city
  Water Research 2025 DOI: 10.1016/j.watres.2025.123102
  +Save
• Antibiotic resistance genes in anaerobic digestion: Unresolved challenges and potential solutions
  Bioresource Technology 2025 DOI: 10.1016/J.BIORTECH.2025.132075
  +Save
• Bacterium-Phage Symbiosis Facilitates the Enrichment of Bacterial Pathogens and Antibiotic-Resistant Bacteria in the Plastisphere
  Environmental Science & Technology 2025 DOI: 10.1021/ACS.EST.4C08265
  +Save
• Species-resolved profiling of antibiotic resistance genes in complex metagenomes through long-read overlapping with Argo
  Nature Communications 2025 DOI: 10.1038/S41467-025-57088-Y
  +Save
• Demonstrating the Beneficial Effect of Low Protein Diet in Primary Sclerosing Cholangitis through a Randomized Clinical Trial and Multi-omics Data Analysis
  2024 DOI: 10.1101/2024.02.23.24303167
  +Save
• ARGNet: using deep neural networks for robust identification and classification of antibiotic resistance genes from sequences
  Microbiome 2024 DOI: 10.1186/s40168-024-01805-0
  +Save
• Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes
  Genome Biology 2024 DOI: 10.1186/s13059-024-03363-y
  +Save
• Metagenomic absolute quantification of antibiotic resistance genes and virulence factor genes-carrying bacterial genomes in anaerobic digesters
  Water Research 2024 DOI: 10.1016/j.watres.2024.121258
  +Save
• Standardization in global environmental antibiotic resistance genes (ARGs) surveillance
  Critical Reviews in Environmental Science and Technology 2024 DOI: 10.1080/10643389.2024.2344453
  +Save
• ARGNet: using deep neural networks for robust identification and classification of antibiotic resistance genes from sequences
  Research Square 2023 DOI: 10.21203/rs.3.rs-3252456
  +Save
• ARGs-OAP v3.0: Antibiotic-Resistance Gene Database Curation and Analysis Pipeline Optimization
  Engineering 2023 DOI: 10.1016/J.ENG.2022.10.011
  +Save
• Ecological dynamics imposes fundamental challenges in community-based microbial source tracking
  iMeta 2023 DOI: 10.1002/IMT2.75
  +Save
• Establishing reference material for the quest towards standardization in environmental microbial metagenomic studies
  Water Research 2023 DOI: 10.1016/j.watres.2023.120641
  +Save
• Global environmental resistome: Distinction and connectivity across diverse habitats benchmarked by metagenomic analyses
  Water Research 2023 DOI: 10.1016/J.WATRES.2023.119875
  +Save
• Is ICE hot? A genomic comparative study reveals integrative and conjugative elements as “hot” vectors for the dissemination of antibiotic resistance genes
  mSystems 2023 DOI: 10.1128/msystems.00178-23
  +Save
• Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes
  bioRxiv 2023 DOI: 10.1101/2023.12.17.572079
  +Save