Adam Nunn

About

Industry-based PhD candidate in Bioinformatics from the University of Leipzig, and situated at ecSeq Bioinformatics GmbH. My research focuses on the application of NGS analyses to bisulfite sequencing data and the development of best-practice bioinformatic pipelines for studying non-model plant species.

Employment

• ecSeq Bioinformatics GmbH EU-Forscher
  2018 - Present
• Exosect Ltd Research Scientist
  2011 - 2015

Education

• Leipzig University PhD Candidate
  2018 - Present
• Lund University MSc Biology & MSc Bioinformatics
  2015 - 2018
• University of Portsmouth BSc Biology
  2008 - 2011

Projects & Funding

Projects & funding information is unavailable.

Publications (15)

• DNA methylation in the wild: epigenetic transgenerational inheritance can mediate adaptation in clones of wild strawberry (Fragaria vesca)
  New Phytologist 2024 DOI: 10.1111/nph.19464
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• DNA methylation in the wild: epigenetic transgenerational inheritance can mediate adaptation in clones of wild strawberry (Fragaria vesca)
  2023 DOI: 10.21203/rs.3.rs-2642365/v1
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• Epigenetic variation in the Lombardy poplar along climatic gradients is independent of genetic structure and persists across clonal reproduction
  2022 DOI: 10.1101/2022.11.17.516862
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• Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense
  PLOS Genetics 2022 DOI: 10.1371/journal.pgen.1010452
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• epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS‐based reduced representation bisulfite sequencing
  Molecular Ecology Resources 2022 DOI: 10.1111/1755-0998.13597
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• Manipulating base quality scores enables variant calling from bisulfite sequencing alignments using conventional Bayesian approaches
  BMC Genomics 2022 DOI: 10.1186/s12864-022-08691-6
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• Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense
  2022 DOI: 10.1101/2022.03.16.484610
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• MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant WGBS data
  2022 DOI: 10.1101/2022.01.06.475031
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• EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics
  NAR genomics and bioinformatics 2021
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• EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics
  NAR Genomics and Bioinformatics 2021 DOI: 10.1093/nargab/lqab106
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