Jie Liu

Employment

• University of Michigan Assistant Professor
  2019 - Present

Education

• University of Wisconsin Madison PhD in Computer Science

Projects & Funding

Projects & funding information is unavailable.

Publications (18)

• AutoPCR: automated phenotype concept recognition by prompting
  Bioinformatics 2026 0 citations DOI: 10.1093/bioinformatics/btag304
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• Deep-Plant: a supervised foundation model for plant regulatory genomics
  2026 0 citations DOI: 10.64898/2026.04.06.716755
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• Enhancing Biomedical AI Foundations: Genomic Literature Knowledge Base Boosts LLMs' Mastery of Biomedical Literature
  2026 0 citations DOI: 10.1145/3770855.3817461
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• CelLink: integrating single-cell multi-omics data with weak feature linkage and imbalanced cell populations
  2025 1 citation DOI: 10.1093/nar/gkaf1270
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• Developing a general AI model for integrating diverse genomic modalities and comprehensive genomic knowledge
  2025 2 citations DOI: 10.1093/nar/gkaf1269
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• Retinoic acid receptor assembly dynamics governs dual functions in cochlear organogenesis
  Proceedings of the National Academy of Sciences 2025 3 citations DOI: 10.1073/pnas.2426739122
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• Genome structure mapping with high-resolution 3D genomics and deep learning
  2025 9 citations DOI: 10.1101/2025.05.06.650874
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• CNTools: A computational toolbox for cellular neighborhood analysis from multiplexed images
  PLOS Computational Biology 2024 7 citations DOI: 10.1371/journal.pcbi.1012344
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• GenomicKB: a knowledge graph for the human genome
  Nucleic Acids Research 2023 44 citations DOI: 10.1093/nar/gkac957
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• A generalizable framework to comprehensively predict epigenome, chromatin organization, and transcriptome
  Nucleic Acids Research 2023 44 citations DOI: 10.1093/nar/gkad436
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