JP
John Pearson
QIMR Berghofer Medical Research Institute, The University of Queensland, Queensland University of Technology, Translational Genomics Research Institute
Research areas: Biochemistry, Genetics and Molecular Biology · Cancer Research · Cancer Genomics and Diagnostics · Pancreatic and Hepatic Oncology Research · Chromatin Remodeling and Cancer
0000-0003-0904-4598
Employment
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QIMR Berghofer Manager2014 - Present
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The University of Queensland Senior Bioinformatics Manager2010 - 2014
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Translational Genomics Research Institute Head, Genomics Research Unit2003 - 2010
Education
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The University of Queensland Graduate Certificate in Engineering and Technology Management1991 - 1994
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Queensland University of Technology Graduate Diploma in Computing Science1989 - 1990
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The University of Queensland B.Sc. Hons (Division 1)1987 - 1987
- 1984 - 1986
Projects & Funding
Projects & funding information is unavailable.
Publications (130)
- Whole genome sequencing in oesophageal adenocarcinoma unmasks potential precision therapies Save
- Cancer genome standards for long-read sequencing using cancer cell line mixtures Save
- Explainable machine learning identifies features and thresholds predictive of immunotherapy response Save
- Integrating breast tumor homologous recombination deficiency status to aid germline BRCA1 and BRCA2 variant classification Save
- Mapping the Proteomic Landscape of Pancreatic Cancer: Prognostic Insights and Subtype Stratification Save
- Multi-omic explainable machine learning improves cancer treatment outcome prediction Save
- xML-workFlow: an end-to-end explainable scikit-learn workflow for rapid biomedical experimentation Save
- Computational immunogenomic approaches to predict response to cancer immunotherapies Save
- Discrepancies in tumor mutation burden reporting from sequential endobronchial ultrasound transbronchial needle aspiration samples within single lymph node stations - brief report Save
- Circulating Tumor DNA Save
- The clinical utility and costs of whole-genome sequencing to detect cancer susceptibility variants—a multi-site prospective cohort study Save
- Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures Save
- Efficient detection and monitoring of pediatric brain malignancies with liquid biopsy based on patient-specific somatic mutation screening Save
- Whole Genome Sequencing in Advanced Lung Cancer can be Performed Using Diff-Quik Cytology Smears Derived from Endobronchial Ultrasound, Transbronchial Needle Aspiration (EBUS TBNA) Save
- Multi-omic features of oesophageal adenocarcinoma in patients treated with preoperative neoadjuvant therapy Save
- Generalising uncertainty improves accuracy and safety of deep learning analytics applied to oncology Save
- Abstract 2209: A proteomic-based prognostic signature of pancreatic adenocarcinoma Save
- Data from Radiomics Biomarkers Correlate with CD8 Expression and Predict Immune Signatures in Melanoma Patients Save
- Australian Genomics: Outcomes of a 5-year national program to accelerate the integration of genomics in healthcare Save
- The Q-IMPROvE (Queensland-IMplementation of PRecision Oncology in brEast cancer) pilot study Save