Joshua Klein

Employment

• Boston University Ph.D. Candidate
  2013 - 2019

Education

• Boston University PhD
  2013 - 2019
• Vassar College Bachelor of Arts with Honors
  2008 - 2012
• Vassar College Bachelor of Arts
  2008 - 2012

Projects & Funding

Projects & funding information is unavailable.

Publications (29)

• ibaqpy: A scalable Python package for baseline quantification in proteomics leveraging SDRF metadata
  2025 DOI: 10.1101/2025.02.08.637208
  +Save
• The Proteomics Standards Initiative Standardized Formats for Spectral Libraries and Fragment Ion Peak Annotations: mzSpecLib and mzPAF
  Analytical Chemistry 2024 DOI: 10.1021/acs.analchem.4c04091
  +Save
• mzIdentML 1.3.0 – Essential progress on the support of crosslinking and other identifications based on multiple spectra
  PROTEOMICS 2024 DOI: 10.1002/pmic.202300385
  +Save
• Expanding N-glycopeptide identifications by modeling fragmentation, elution, and glycome connectivity
  Nature Communications 2024 DOI: 10.1038/s41467-024-50338-5
  +Save
• Improving Statistical Certainty of Glycosylation Similarity between Influenza A Virus Variants Using Data-Independent Acquisition Mass Spectrometry
  Molecular & Cellular Proteomics 2022 DOI: 10.1016/j.mcpro.2022.100412
  +Save
• Data-independent acquisition mass spectrometry for site-specific glycoproteomics characterization of SARS-CoV-2 spike protein
  Analytical and Bioanalytical Chemistry 2021 DOI: 10.1007/s00216-021-03643-7
  +Save
• ExpandingN-Glycopeptide Identifications by Fragmentation Prediction and Glycome Network Smoothing
  2021 DOI: 10.1101/2021.02.14.431154
  +Save
• Assignment of coronavirus spike protein site-specific glycosylation using GlycReSoft
  2020 DOI: 10.1101/2020.05.31.125302
  +Save
• Protocol for analysis of glycoproteomics LC-MS data using GlycReSoft
  2020 DOI: 10.1101/2020.05.22.108928
  +Save
• Relative Retention Time Estimation Improves N-Glycopeptide Identifications by LC–MS/MS
  Journal of Proteome Research 2020 DOI: 10.1021/acs.jproteome.0c00051
  +Save