Abhishek Kumar

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Publications (7)

• Structure-based thermodynamics of ion selectivity (Mg2+versus Ca2+ and K+versus Na+) in the active site of the eukaryotic lariat group II intron from algae Pylaiella littoralis
  Physical Chemistry Chemical Physics 2022 DOI: 10.1039/D2CP03472G
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• Divalent-Metal-Ion Selectivity of the CRISPR-Cas System-Associated Cas1 Protein: Insights from Classical Molecular Dynamics Simulations and Electronic Structure Calculations
  The Journal of Physical Chemistry B 2021 DOI: 10.1021/acs.jpcb.1c07744
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• Mimicking human Drp1 disease-causing mutations in yeast Dnm1 reveals altered mitochondrial dynamics
  Mitochondrion 2021 DOI: 10.1016/j.mito.2021.06.009
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• Mg2+ vs Ca2+ bound active site of group II intron– A MD study
  Journal of Molecular Graphics and Modelling 2020 DOI: 10.1016/j.jmgm.2020.107546
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• Mutations in Parkinson’s Disease Associated Protein DJ-1 Alter the Energetics of DJ-1 Dimerization
  Journal of Chemical Information and Modeling 2019 DOI: 10.1021/acs.jcim.8b00687
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• Principle of K+/Na+ selectivity in the active site of group II intron at various stages of self-splicing pathway
  Journal of Molecular Graphics and Modelling 2018 DOI: 10.1016/j.jmgm.2018.05.003
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• 3D-NuS: A Web Server for Automated Modeling and Visualization of Non-Canonical 3-D imensional Nu cleic Acid S tructures
  Journal of Molecular Biology 2017 DOI: 10.1016/j.jmb.2017.06.013
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