Jennifer Lee Havens

Employment

Employment history is unavailable.

Education

• University of California San Diego PhD

Projects & Funding

Projects & funding information is unavailable.

Publications (16)

• Dynamics of natural selection preceding human viral epidemics and pandemics
  Cell 2026 DOI: 10.1016/j.cell.2026.02.006
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• Synonymous substitution rate slowdown preceding the emergence of SARS-CoV-2 variants and during persistent infections
  2026 DOI: 10.64898/2026.01.26.26344861
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• Slowdown of synonymous substitution rate preceding the emergence of multiple SARS-CoV-2 variants
  Virus Evolution 2026 DOI: 10.1093/ve/veag054
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• Genomic epidemiology of mpox virus during the 2022 outbreak in New York City
  Nature Communications 2025 DOI: 10.1038/s41467-025-60486-x
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• Phylogeographic and genetic network assessment of COVID-19 mitigation protocols on SARS-CoV-2 transmission in university campus residences
  eBioMedicine 2025 DOI: 10.1016/j.ebiom.2025.105729
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• The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2
  Cell 2025 DOI: 10.1016/j.cell.2025.03.035
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• Dynamics of natural selection preceding human viral epidemics and pandemics
  2025 DOI: 10.1101/2025.02.26.640439
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• The role of socio-economic disparities in the relative success and persistence of SARS-CoV-2 variants in New York City in early 2021
  Tetyana I. Vasylyeva, Jennifer L. Havens, Jade C. Wang +8 more
  PLOS Pathogens 2024 DOI: 10.1371/journal.ppat.1012288
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• Chemical Inhibition of Bromodomain Proteins in Insect-Stage African Trypanosomes Perturbs Silencing of the Variant Surface Glycoprotein Repertoire and Results in Widespread Changes in the Transcriptome
  Microbiology Spectrum 2023 DOI: 10.1128/spectrum.00147-23
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• Chemical inhibition of bromodomain proteins in insect stage African trypanosomes perturbs silencing of the Variant Surface Glycoprotein repertoire and results in widespread changes in the transcriptome
  2023 DOI: 10.1101/2023.01.09.523188
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• Phylogeographic analysis reveals an ancient East African origin of human herpes simplex virus 2 dispersal out-of-Africa
  Nature Communications 2022 DOI: 10.1038/s41467-022-33214-y
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• The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2
  Science 2022 DOI: 10.1126/science.abp8337
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• Regional connectivity drove bidirectional transmission of SARS-CoV-2 in the Middle East during travel restrictions
  Nature Communications 2022 DOI: 10.1038/s41467-022-32536-1
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• Introduction and Establishment of SARS-CoV-2 Gamma Variant in New York City in Early 2021
  Tetyana I. Vasylyeva, Courtney E. Fang, Michelle Su +10 more
  The Journal of Infectious Diseases 2022 DOI: 10.1093/infdis/jiac265
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• Detection of SARS-CoV-2 intra-host recombination during superinfection with Alpha and Epsilon variants in New York City
  Nature Communications 2022 DOI: 10.1038/s41467-022-31247-x
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• Detection and characterization of the SARS-CoV-2 lineage B.1.526 in New York
  Nature Communications 2021 DOI: 10.1038/s41467-021-25168-4
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