Tim Dunn

Employment

Employment history is unavailable.

Education

• Clarkson University BS in Electrical Engineering and Computer Science
  2015 - 2019

Projects & Funding

Projects & funding information is unavailable.

Publications (8)

• Development of a Rapid, Culture-Free, Universal Microbial Identification System Using Internal Transcribed Spacer Targeting Primers
  Vishwaratn Asthana, Erika Martínez Nieves, Pallavi Bugga +5 more
  The Journal of Infectious Diseases 2025 DOI: 10.1093/infdis/jiae545
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• Jointly benchmarking small and structural variant calls with vcfdist
  Genome Biology 2024 DOI: 10.1186/s13059-024-03394-5
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• A rapid, inexpensive, culture-free, universal bacterial identification system using internal transcribed spacer targeting primers: a proof-of-principle study
  2024 DOI: 10.1101/2024.09.15.613074
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• Jointly benchmarking small and structural variant calls with vcfdist
  2024 DOI: 10.1101/2024.01.23.575922
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• vcfdist: accurately benchmarking phased small variant calls in human genomes
  Tim Dunn, Satish Narayanasamy
  Nature Communications 2023 DOI: 10.1038/s41467-023-43876-x
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• GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis
  Yufeng Gu, Arun Karthi Subramaniyan, Tim Dunn +8 more
  2023 DOI: 10.1145/3579371.3589060
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• nPoRe: n-polymer realigner for improved pileup-based variant calling
  Tim Dunn, David T. Blaauw, Reetuparna Das +1 more
  BMC Bioinformatics 2023 DOI: 10.1186/s12859-023-05193-4
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• A cloud-based pipeline for analysis of FHIR and long-read data
  Bioinformatics Advances 2023 DOI: 10.1093/bioadv/vbac095
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