SP
Swetansu Pattnaik
UCL Queen Square Institute of Neurology, Illumina (Australia), University at Buffalo, State University of New York, Garvan Institute of Medical Research
Research areas: Biochemistry, Genetics and Molecular Biology · Molecular Biology · BRCA gene mutations in cancer · Ovarian cancer diagnosis and treatment · Genomics and Phylogenetic Studies
0000-0003-3598-7733
Employment
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UCL Queen Square Institute of Neurology Principal Research Fellow2026 - Present
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Illumina (Australia) Staff Bioinformatics Scientist2024 - 2026
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Illumina (Australia) Senior Bioinformatics Scientist2022 - 2024
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Garvan Institute of Medical Research Bioinformatician2015 - 2022
Education
Projects & Funding
Projects & funding information is unavailable.
Publications (22)
- A conserved thermodynamic signature links transcriptome organization to growth state Save
- Overcoming intra-tumoral heterogeneity for biomarker discovery in the high-grade serous ovarian cancer proteome Save
- N-MYC impairs innate immune signaling in high-grade serous ovarian carcinoma Save
- Heritable defects in telomere and mitotic function selectively predispose to sarcomas Save
- Targeted gene panels identify a high frequency of pathogenic germline variants in patients diagnosed with a hematological malignancy and at least one other independent cancer Save
- Assessment of HR deficiency in ovarian cancer to increase PARP inhibitor targets beyond BRCA1/2 Save
- Cyclin E1 (CCNE1) gene amplification assessment in prospectively recruited ovarian cancer patients Save
- Cancer stemness, intratumoral heterogeneity, and immune response across cancers. Save
- Multiple ABCB1 transcriptional fusions in drug resistant high-grade serous ovarian and breast cancer. Save
- Network-aware mutation clustering of cancer Save
- Abstract 3393: Characterizing recurrent high-grade serous ovarian cancer through whole-genome sequencing Save
- Reversion of BRCA1/2 Germline Mutations Detected in Circulating Tumor DNA From Patients With High-Grade Serous Ovarian Cancer. Save
- Integrated analysis of oral tongue squamous cell carcinoma identifies key variants and pathways linked to risk habits, HPV, clinical parameters and tumor recurrence. Save
- SInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data. Save
- A draft of the genome and four transcriptomes of a medicinal and pesticidal angiosperm Azadirachta indica. Save
- Customisation of the exome data analysis pipeline using a combinatorial approach. Save
- De novo sequencing and assembly of Azadirachta indica fruit transcriptome Save
- PD30. Identification of novel somatic mutations and structural variations in tongue cancer, matched leukoplakia and normal tissue by genome sequencing Save
- Engineering of the Redox Ribozyme for the Determination of Its Architecture Save
- Reengineering aninvitroevolved ribozyme Save