Burcu Aykaç Fas

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Publications (18)

• MAVISp: A modular structure-based framework for protein variant effects.
  Matteo Arnaudi, Mattia Utichi, Kristine Degn +30 more
  Protein science : a publication of the Protein Society 2026 DOI: 10.1002/pro.70548
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• Global dynamics behind enzyme catalysis, evolution, and design
  Current Opinion in Structural Biology 2025 DOI: 10.1016/j.sbi.2025.103131
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• Structural profiles of the full phagocyte NADPH oxidase unveiled by combining computational biology and experimental knowledge
  Journal of Biological Chemistry 2024 DOI: 10.1016/j.jbc.2024.107943
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• Combining computational biology and experimental knowledge to draw a structural profile of the active membrane-assembled NADPH oxidase complex
  2024 DOI: 10.1101/2024.02.19.579638
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• A Perspective on the Prospective Use of AI in Protein Structure Prediction
  Journal of Chemical Information and Modeling 2024 DOI: 10.1021/acs.jcim.3c01361
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• A Perspective on the Prospective Use of AI in Protein Structure Prediction
  2023 DOI: 10.31219/osf.io/75kfs
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• Editorial: In Celebration of Women in Science: Biological Modeling and Simulation
  Frontiers in Molecular Biosciences 2023 DOI: 10.3389/fmolb.2023.1175325
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• MAVISp: A Modular Structure-Based Framework for Protein Variant Effects
  2022 DOI: 10.1101/2022.10.22.513328
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• The conformational and mutational landscape of the ubiquitin-like marker for autophagosome formation in cancer
  Burcu Aykaç Fas, Emiliano Maiani, Valentina Sora +5 more
  Autophagy 2021 DOI: 10.1080/15548627.2020.1847443
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• Ubiquitin Interacting Motifs: Duality Between Structured and Disordered Motifs
  Frontiers in Molecular Biosciences 2021 DOI: 10.3389/fmolb.2021.676235
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• Critical assessment of protein intrinsic disorder prediction.
  Nature methods 2021 DOI: 10.1038/s41592-021-01117-3
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• Critical Assessment of Protein Intrinsic Disorder Prediction
  2020 DOI: 10.1101/2020.08.11.245852
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• Distinct Allosteric Networks Underlie Mechanistic Speciation of ABC Transporters
  Structure 2020 DOI: 10.1016/j.str.2020.03.014
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• DisProt: intrinsic protein disorder annotation in 2020.
  Nucleic acids research 2019 DOI: 10.1093/nar/gkz975
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• The conformational and mutational landscape of the ubiquitin-like marker for the autophagosome formation in cancer
  2019 DOI: 10.1101/635284
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• Single-molecule probing of the conformational homogeneity of the ABC transporter BtuCD
  Nature Chemical Biology 2018 DOI: 10.1038/s41589-018-0088-2
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• Dynamic Fluctuations Provide the Basis of a Conformational Switch Mechanism in Apo Cyclic AMP Receptor Protein
  PLoS Computational Biology 2013 DOI: 10.1371/journal.pcbi.1003141
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• Contributions to DisProt
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