Debayan Chakraborty

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Publications (36)

• Exploring the Energy Landscape of Hairpin Folding using the TIS-DNA model
  2026 DOI: 10.64898/2026.02.24.707746
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• Effect of Glycosylation on the Free Energy Landscape of the Catalytic Domain of Human Carbonic Anhydrase IX
  2026 DOI: 10.64898/2026.08.25.747051
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• Brewing COFFEE: A Sequence-Specific Coarse-Grained Energy Function for Simulations of DNA−Protein Complexes
  Journal of Chemical Theory and Computation 2024 DOI: 10.1021/acs.jctc.3c00833
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• Conformational fluctuations and phases in fused in sarcoma (FUS) low‐complexity domain
  Biopolymers 2024 DOI: 10.1002/bip.23558
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• Brewing COFFEE: A sequence-specific coarse-grained energy function for simulations of DNA-protein complexes
  2023 DOI: 10.1101/2023.06.07.544064
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• Sizes, conformational fluctuations, and SAXS profiles for Intrinsically Disordered Proteins
  2023 DOI: 10.1101/2023.04.24.538147
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• Energy landscapes of Aβ monomers are sculpted in accordance with Ostwald’s rule of stages
  Science Advances 2023 DOI: 10.1126/sciadv.add6921
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• Energy landscapes of Aβ monomers are sculpted in accordance with Ostwald’s rule of stages
  2022 DOI: 10.1101/2022.06.16.496424
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• Energy Landscapes for Base-Flipping in a Model DNA Duplex
  The Journal of Physical Chemistry B 2022 DOI: 10.1021/acs.jpcb.2c00340
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• Side-Chain Polarity Modulates the Intrinsic Conformational Landscape of Model Dipeptides
  The Journal of Physical Chemistry B 2021 DOI: 10.1021/acs.jpcb.1c02412
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