Anup Kumar Halder

Employment

• Indian Institute of Information Technology Design and Manufacturing, Kurnool Assistant Professor
  2025 - Present
• Indian Institute of Information Technology Raichur Assistant Professor
  2024 - 2025
• University of Warsaw Postdoctoral Fellow
  2024 - 2024
• Warsaw University of Technology Assistant Professor ( Research)
  2022 - 2024
• University of Engineering & Management Assistant Professor
  2021 - 2021
• University of Warsaw Researcher
  2018 - 2018
• Jadavpur University Visvesvaraya PhD Fellow
  2015 - 2020

Education

• Jadavpur University PhD (Engg)
  2015 - 2021
• Jadavpur University ME
  2012 - 2014

Projects & Funding

Projects & funding information is unavailable.

Publications (28)

• SIP-BERT: A multi-organism deep strategy for predicting self interaction in proteins
  2026 DOI: 10.64898/2026.02.04.702782
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• DensePPI-2: a bio-inspired update for sequence-based PPI prediction leveraging mutation rates
  Briefings in Bioinformatics 2025 DOI: 10.1093/bib/bbaf394
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• PCPredG: Protein Complex Prediction Using Graphlet Features
  IEEE Transactions on Computational Biology and Bioinformatics 2025 DOI: 10.1109/TCBBIO.2025.3540117
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• A systematic analyses of different bioinformatics pipelines for genomic data and its impact on deep learning models for chromatin loop prediction
  Briefings in Functional Genomics 2024 DOI: 10.1093/bfgp/elae009
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• Structural Variants and Implicated Processes Associated with Familial Tourette Syndrome
  International Journal of Molecular Sciences 2024 DOI: 10.3390/ijms25115758
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• FuzzyPPI: Large-Scale Interaction of Human Proteome at Fuzzy Semantic Space
  IEEE Transactions on Big Data 2024 DOI: 10.1109/tbdata.2024.3375149
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• Prediction of S-Palmitoylation Sites in the Male/Female Mouse Using the Protein Language Model
  2024 DOI: 10.1007/978-981-97-2611-0_30
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• DensePPI: A Novel Image-Based Deep Learning Method for Prediction of Protein–Protein Interactions
  IEEE Transactions on NanoBioscience 2023 DOI: 10.1109/TNB.2023.3251192
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• ccLoopER: Deep Prediction of CTCF and cohesin Mediated Chromatin looping Using DNA Transformer Model
  2023 DOI: 10.1007/978-3-031-45170-6_91
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• DeConPPI: Deep Consensus-Based Prediction of Protein-Protein Interactions
  2023 DOI: 10.1007/978-981-99-2680-0_42
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