ND
Nadia Davidson
Walter and Eliza Hall Institute of Medical Research, Peter MacCallum Cancer Centre, The University of Melbourne, Murdoch Children's Research Institute
Research areas: Physics and Astronomy · Nuclear and High Energy Physics · Particle physics theoretical and experimental studies · Particle Detector Development and Performance · Quantum Chromodynamics and Particle Interactions
0000-0002-8461-7467
Employment
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Walter and Eliza Hall Institute Laboratory Head2022 - Present
- 2019 - 2021
- 2011 - 2019
Education
- 2006 - 2011
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University of Melbourne BSc (Hons)2000 - 2006
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University of Melbourne BE (Software Engineering)2000 - 2004
Projects & Funding
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Pioneering data analysis methods to decrypt the cancer transcriptome National Health and Medical Research Council2022 - Present
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Unlocking hidden cancer drivers using transcriptome data National Health and Medical Research Council2018 - 2020
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Development of a predictive model for alternative splicing based on epigenetic state Swiss National Science Foundation2013 - 2013
Publications (43)
- Nailpolish: Reference-free UMI deduplication and consensus read generation Save
- seqsizzle: decoding complex barcode and adapter architectures in long-read sequencing data Save
- MNT loss in MYC-driven B lymphoma cells enhances apoptosis, inhibits proliferation and increases sensitivity to cancer drugs Save
- IdentifiHR predicts homologous recombination deficiency in high-grade serous ovarian carcinoma using gene expression Save
- Necroptotic cell death consequences and disease relevance Save
- A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell lines Save
- Single-cell Rapid Capture Hybridization sequencing reliably detects isoform usage and coding mutations in targeted genes Save
- From pipettes to playdates: establishing a parent support group in a research setting Save
- Towards accurate, reference-free differential expression: A comprehensive evaluation of long-read de novo transcriptome assembly Save
- IdentifiHR: predicting homologous recombination deficiency in high-grade serous ovarian carcinoma using gene expression Save
- Novel CDKL5 targets identified in human iPSC-derived neurons Save
- Flexiplex: a versatile demultiplexer and search tool for omics data Save
- Extraction and quantification of lineage-tracing barcodes with NextClone and CloneDetective Save
- Variants in SART3 cause a spliceosomopathy characterised by failure of testis development and neuronal defects Save
- Unusual PDGFRB fusion reveals novel mechanism of kinase activation in Ph-like B-ALL. Save
- ALLSorts: an RNA-Seq subtype classifier for B-cell acute lymphoblastic leukemia Save
- JAFFAL: detecting fusion genes with long-read transcriptome sequencing Save
- SFPQ-ABL1 and BCR-ABL1 use different signaling networks to drive B-cell acute lymphoblastic leukemia Save
- MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data Save
- Slinker: Visualising novel splicing events in RNA-Seq data Save